Publications

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Nabeel Khalid; Tiago Comassetto Froes; Maria Caroprese; Gillian Lovell; Johan Trygg; Andreas Dengel; Sheraz Ahmed
PACE: Point Annotation-Based Cell Segmentation for Efficient Microscopic Image Analysis
In: ICANN 2023. International Conference on Artificial Neural Networks (ICANN-2023), 32nd International Conference on Artificial Neural Networks, …
Nabeel Khalid; Fabian Schmeisser; Mohammadmahdi Koochali; Mohsin Munir; Christoffer Edlund; Rickard Sjögren; Andreas Dengel; Sheraz Ahmed
Point2Mask: A Weakly Supervised Approach for Cell Segmentation using Point Annotation
In: 2022 Annual Conference on Medical Image Understanding and Analysis. Medical Image Understanding and Analysis (MIUA-2022), July 25-29, Cambridge, …
Nabeel Khalid; Mohammadmahdi Koochali; Vikas Rajashekar; Mohsin Munir; Christoffer Edlund; Rickard Sjögren; Andreas Dengel; Sheraz Ahmed
DeepMuCS: A Framework for Co-culture Microscopic Image Analysis: From Generation to Segmentation
In: 2022 IEEE-EMBS International Conference on Biomedical and Health Informatics (BHI). IEEE-EMBS International Conference on Biomedical and Health …
Christoffer Edlund; Timothy R. Jackson; Nabeel Khalid; Nicola Bevan; Timothy Dale; Andreas Dengel; Sheraz Ahmed; Johan Trygg; Rickard Sjögren
LIVECell—A large-scale dataset for label-free live cell segmentation
In: Nature Research, Vol. None, Pages 1-8, Nature Methods, 8/2021.
Nabeel Khalid; Mohsin Munir; Christoffer Edlund; Timothy R Jackson; Johan Tryggy; Rickard Sjögren; Andreas Dengel; Sheraz Ahmed
DeepCIS: An end-to-end Pipeline for Cell-type aware Instance Segmentation in Microscopic Images
In: IEEE-EMBS INTERNATIONAL CONFERENCE ON BIOMEDICAL AND HEALTH INFORMATICS (BHI’21) JOINTLY ORGANISED WITH THE 17TH IEEE-EMBS INTERNATIONAL …
Anna M. Schlagowski; Katharina Knöringer; Sandrine Morlot; Ana Sáchez Vicente; Felix Boos; Nabeel Khalid; Sheraz Ahmed; Jana Schramm; Lena Maria Murschall; Per Haberkant; Frank Stein; Jan Riemer; Benedikt Westermann; Ralf J. Braun; Konstanze F. Winklhofer; Gilles Charvin; Johannes M. Herrmann1
Increased levels of the mitochondrial import factor Mia40 prevent the aggregation of polyQ proteins in the cytosol
In: The EMBO Journal (EMBO J 2021), Vol. None, Pages 1-44, The EMBO Journal, 6/2021.
Nabeel Khalid; Mohsin Munir; Christoffer Edlund; Timothy R Jackson; Johan Tryggy; Rickard Sjögren; Andreas Dengel; Sheraz Ahmed
DeepCeNS: An end-to-end Pipeline for Cell and Nucleus Segmentation in Microscopic Images
In: 2021 International Joint Conference on Neural Networks (IJCNN). International Joint Conference on Neural Networks (IJCNN-2021), July 18-20, …
Markus Schröder; Christian Jilek; Andreas Dengel
Interactive Concept Mining on Personal Data – Bootstrapping Semantic Services
In: Computing Research Repository eprint Journal (CoRR), Vol. abs/1903.05872, Pages 1-5, arXiv, 3/2019.
Markus Schröder
Efficient High-Level Semantic Enrichment of Undocumented Enterprise Data
In: The Semantic Web: ESWC 2019 Satellite Events. Extended Semantic Web Conference (ESWC-2019), June 2-6, Portoroz, Slovenia, Springer, 2019.
Marco Stricker; Syed Saqib Bukhari; Damian Borth; Andreas Dengel
Saliency Based Adjective Noun Pair Detection System
In: Proceedings of the 10th International Conference on Agents and Artificial Intelligence. International Conference on Agents and Artificial …